Publication profile

Marit Holden

Name:	Marit Holden
Title:	Sjefsforsker / Chief Research Scientist
Phone:	(+47) +47 22 85 26 77
Email:	marit [at] nr [dot] no
Scientific areas:	Bioinformatics, Functional genomics, Image analysis, Pattern recognition, Deep learning, Markov Chain Monte Carlo (MCMC) simulation,
Homepage:	Public profile
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Academic article

2022

Dahl, Fredrik Andreas; Holden, Marit; Brautaset, Olav; Eikvil, Line. A mammography classification model trained from image labels only. Proceedings of the Northern Lights Deep Learning Workshop. doi: 10.7557/18.6244. 2022.

2021

Jareid, Mie; Snapkov, Igor; Holden, Marit; Rasmussen Busund, Lill-Tove; Lund, Eiliv; Nøst, Therese Haugdahl. The blood transcriptome prior to ovarian cancer diagnosis: A case-control study in the NOWAC postgenome cohort. PLOS ONE (ISSN 1932-6203). 16:e0256442(8) pp 1-20. doi: 10.1371/journal.pone.0256442. 2021. Arkiv

Olsen, Karina Standahl; Holden, Marit; Thalabard, Jean-Christophe; Busund, Lill-Tove Rasmussen; Lund, Eiliv; Holden, Lars. Global blood gene expression profiles following a breast cancer diagnosis—Clinical follow-up in the NOWAC post-genome cohort. PLOS ONE (ISSN 1932-6203). 16(3) pp 1-20. doi: 10.1371/journal.pone.0246650. 2021. Arkiv

Nøst, Therese H.; Holden, Marit; Dønnem, Tom; Bøvelstad, Hege; Rylander, Charlotta; Lund, Eiliv; Sandanger, Torkjel M. Transcriptomic signals in blood prior to lung cancer focusing on time to diagnosis and metastasis. Scientific Reports (ISSN 2045-2322). 11 pp 1-11. doi: 10.1038/s41598-021-86879-8. 2021. Arkiv

2020

Gilbert, Andrew David; Holden, Marit; Eikvil, Line; Rakhmail, Mariia; Babic, Aleksandar; Aase, Svein Arne; Samset, Eigil; Mcleod, Kristin. User-Intended Doppler Measurement Type Prediction Combining CNNs With Smart Post-Processing. IEEE journal of biomedical and health informatics (ISSN 2168-2194). doi: 10.1109/JBHI.2020.3029392. 2020. Arkiv

Gautvik, Kaare M; Günther, Clara-Cecilie; Prijatelj, Vid; Medina-Gomez, Carolina; Shevroja, Enisa; Rad, Leila Heidary; Yazdani, Mazyar; Lindalen, Einar; Valland, Haldor; Gautvik, Vigdis Teig; Olstad, Ole Kristoffer; Holden, Marit; Rivadeneira, Fernando; Utheim, Tor Paaske; Reppe, Sjur. Distinct subsets of noncoding RNAs are strongly associated with BMD and fracture, studied in weight-bearing and non-weight-bearing human bone. Journal of Bone and Mineral Research (ISSN 0884-0431). 35(6) pp 1065-1076. doi: 10.1002/jbmr.3974. 2020. Arkiv

2019

Gilbert, Andrew David; Holden, Marit; Eikvil, Line; Aase, Svein Arne; Samset, Eigil; Mcleod, Kristin. Automated Left Ventricle Dimension Measurement in 2D Cardiac Ultrasound via an Anatomically Meaningful CNN Approach. Lecture Notes in Computer Science (LNCS) (ISSN 0302-9743). 11798 LNCS pp 29-37. doi: 10.1007/978-3-030-32875-7_4. 2019. Fulltekst

2018

Aqrawi, Lara Adnan; Jensen, Janicke Liaaen; Øijordsbakken, Gunnvor; Ruus, Ann-Kristin; Nygård, Ståle; Holden, Marit; Jonsson, Roland; Galtung, Hilde; Skarstein, Kathrine. Signalling pathways identified in salivary glands from primary Sjögren's syndrome patients reveal enhanced adipose tissue development. Autoimmunity (ISSN 0891-6934). 51(3) pp 135-146. doi: 10.1080/08916934.2018.1446525. 2018.

Lund, Eiliv; Nakamura, Aurelie; Snapkov, Igor; Thalabard, Jean-Christophe; Olsen, Karina Standahl; Holden, Lars; Holden, Marit. Each pregnancy linearly changes immune gene expression in the blood of healthy women compared with breast cancer patients. Clinical Epidemiology (ISSN 1179-1349). doi: 10.2147/CLEP.S163208. 2018. Arkiv

Skeie, Ragnhild Bieltvedt; Berntsen, Terje Koren; Aldrin, Magne Tommy; Holden, Marit; Myhre, Gunnar. Climate sensitivity estimates - Sensitivity to radiative forcing time series and observational data. Earth System Dynamics (ESD) (ISSN 2190-4979). 9(2) pp 879-894. doi: 10.5194/esd-9-879-2018. 2018. Arkiv

2017

Simovski, Boris; Vodak, Daniel; Gundersen, Sveinung; Domanska, Diana Ewa; Azab, Abdulrahman; Holden, Lars; Holden, Marit; Grytten, Ivar; Rand, Knut Dagestad; Drabløs, Finn; Johansen, Morten; Mora Ortiz, Antonio Carlos; Lund-Andersen, Christin; Fromm, Bastian; Eskeland, Ragnhild; Gabrielsen, Odd Stokke; Ferkingstad, Egil; Nakken, Sigve; Bengtsen, Mads; Nederbragt, Alexander Johan; Thorarensen, Hildur Sif; Akse, Johannes Andreas; Glad, Ingrid Kristine; Hovig, Johannes Eivind; Sandve, Geir Kjetil. GSuite HyperBrowser: integrative analysis of dataset collections across the genome and epigenome. GigaScience (ISSN 2047-217X). 6(7) pp 1-12. doi: 10.1093/gigascience/gix032. 2017. Arkiv Fulltekst

Holden, Marit; Holden, Lars; Olsen, Karina Standahl; Lund, Eiliv. Local In Time Statistics for detecting weak gene expression signals in blood – illustrated for prediction of metastases in breast cancer in the NOWAC Post-genome Cohort. Advances in Genomics and Genetics (ISSN 1179-9870). 7 pp 11-28. doi: 10.2147/AGG.S130004. 2017. Arkiv Fulltekst

2016

Lund, Eiliv; Holden, Lars; Bøvelstad, Hege; Plancade, Sandra Caroline; Mode, Nicolle; Günther, Clara-Cecilie; Nuel, Gregory; Thalabard, Jean-Christophe; Holden, Marit. A new statistical method for curve group analysis of longitudinal gene expression data illustrated for breast cancer in the NOWAC postgenome cohort as a proof of principle. BMC Medical Research Methodology (ISSN 1471-2288). 16(28) doi: 10.1186/s12874-016-0129-z. 2016. Arkiv

Myhrstad, Mari; Ottestad, Inger; Günther, Clara-Cecilie; Ryeng, Einar; Holden, Marit; Nilsson, Astrid; Brønner, Kirsti Wettre; Kohler, Achim; Borge, Grethe Iren Andersen; Holven, Kirsten Bjørklund; Ulven, Stine Marie. The PBMC transcriptome profile after intake of oxidized versus high-quality fish oil: an explorative study in healthy subjects. Genes & Nutrition (ISSN 1555-8932). 11:16 doi: 10.1186/s12263-016-0530-6. 2016. Arkiv

2015

Lau, Corinna; Olstad, Ole Kristoffer; Holden, Marit; Nygård, Ståle; Fure, Hilde; Lappegård, Knut Tore; Brekke, Ole Lars; Espevik, Terje; Hovig, Johannes Eivind; Mollnes, Tom Eirik. Gene expression profiling of Gram-negative bacteria-induced inflammation in human whole blood: The role of complement and CD14-mediated innate immune response. Genomics Data (ISSN 2213-5960). 5 pp 176-183. doi: 10.1016/j.gdata.2015.05.019. 2015. Arkiv

Lau, Corinna; Nygård, Ståle; Fure, Hilde; Olstad, Ole Kristoffer; Holden, Marit; Lappegård, Knut Tore; Brekke, Ole Lars; Espevik, Terje; Hovig, Johannes Eivind; Mollnes, Tom Eirik. CD14 and complement crosstalk and largely mediate the transcriptional response to Escherichia coli in human whole blood as revealed by DNA microarray. PLOS ONE (ISSN 1932-6203). 10(2) doi: 10.1371/journal.pone.0117261. 2015. Arkiv

Omair, Ahmad; Mannion, Anne F.; Holden, Marit; Leivseth, Gunnar; Fairbank, Jeremy; Hägg, Olle; Fritzell, Peter; Brox, Jens Ivar. Age and pro-inflammatory gene polymorphisms influence adjacent segment disc degeneration more than fusion does in patients treated for chronic low back pain. European spine journal (ISSN 0940-6719). pp 2-13. doi: 10.1007/s00586-015-4181-x. 2015.

Omair, Ahmad; Mannion, Anne F.; Holden, Marit; Fairbank, Jeremy; Lie, Benedicte Alexandra; Hägg, Olle; Fritzell, Peter; Brox, Jens Ivar. Catechol-O-methyltransferase (COMT) gene polymorphisms are associated with baseline disability but not long-term treatment outcome in patients with chronic low back pain. European spine journal (ISSN 0940-6719). 24(11) pp 2425-2431. doi: 10.1007/s00586-015-3866-5. 2015.

Eikvil, Line; Jenssen, Tor-Kristian; Holden, Marit. Multi-focus cluster labeling. Journal of Biomedical Informatics (ISSN 1532-0464). 55 pp 116-123. doi: 10.1016/j.jbi.2015.03.012. 2015.

2014

Paulsen, Jonas; Rødland, Einar Andreas; Holden, Lars; Holden, Marit; Hovig, Johannes Eivind. A statistical model of ChIA-PET data for accurate detection of chromatin 3D interactions. Nucleic Acids Research (NAR) (ISSN 0305-1048). 42(18) pp e143. doi: 10.1093/nar/gku738. 2014. Fulltekst

Myhrstad, Mari; Ulven, Stine Marie; Günther, Clara-Cecilie; Ottestad, Inger; Holden, Marit; Ryeng, Einar; Borge, Grethe Iren Andersen; Kohler, Achim; Brønner, Kirsti Wettre; Thoresen, Magne; Holven, Kirsten Bjørklund. Fish oil supplementation induces Expression of genes related to cell cycle, endoplasmic reticulum stress and apoptosis in peripheral blood mononuclear cells: a transcriptomic approach. Journal of Internal Medicine (ISSN 0954-6820). 276(5) pp 498-511. doi: 10.1111/joim.12217. 2014. Arkiv

Eikvil, Line; Holden, Marit. Evaluation of Binary Descriptors for Fast and Fully Automatic Identification. International Conference on Pattern Recognition (ISSN 1051-4651). pp 154-159. doi: 10.1109/ICPR.2014.36. 2014.

Skeie, Ragnhild Bieltvedt; Berntsen, Terje Koren; Aldrin, Magne Tommy; Holden, Marit; Myhre, Gunnar. A lower and more constrained estimate of climate sensitivity using updated observations and detailed radiative forcing time series. Earth System Dynamics (ESD) (ISSN 2190-4979). 5(1) pp 139-175. doi: 10.5194/esd-5-139-2014. 2014.

2013

Sandve, Geir Kjetil; Gundersen, Sveinung; Johansen, Morten; Glad, Ingrid Kristine; Gunathasan, Krishanthi; Holden, Lars; Holden, Marit; Liestøl, Knut; Nygård, Ståle; Nygaard, Vegard; Paulsen, Jonas; Rydbeck, Halfdan; Trengereid, Kai; Clancy, Trevor; Drabløs, Finn; Ferkingstad, Egil; Kalaš, Matúš; Lien, Tonje Gulbrandsen; Rye, Morten Beck; Frigessi, Arnoldo; Hovig, Johannes Eivind. The Genomic HyperBrowser: an analysis web server for genome-scale data. Nucleic Acids Research (NAR) (ISSN 0305-1048). 41(W1) pp W133-W141. doi: 10.1093/nar/gkt342. 2013. Arkiv

Schee, Kristina; Lorenz, Susanne; Worren, Merete Molton; Günther, Clara-Cecilie; Holden, Marit; Hovig, Johannes Eivind; Fodstad, Øystein; Meza, Leonardo Zepeda; Flatmark, Kjersti. Deep Sequencing the MicroRNA Transcriptome in Colorectal Cancer. PLOS ONE (ISSN 1932-6203). 8(6) doi: 10.1371/journal.pone.0066165. 2013.

Omair, Ahmad; Holden, Marit; Lie, Benedicte Alexandra; Reikerås, Olav; Brox, Jens Ivar. Treatment outcome of chronic low back pain and radiographic lumbar disc degeneration are associated with inflammatory and matrix degrading gene variants: a prospective genetic association study. BMC Musculoskeletal Disorders (ISSN 1471-2474). 14(105) doi: 10.1186/1471-2474-14-105. 2013.

Lando, Malin; Wilting, Saskia M.; Snipstad, Kristin; Clancy, Trevor; Bierkens, Mariska; Aarnes, Eva-Katrine; Holden, Marit; Stokke, Trond; Sundfør, Kolbein; Holm, Ruth; Kristensen, Gunnar S Balle; Steenbergen, Renske D.M.; Lyng, Heidi. Identification of eight candidate target genes of the recurrent 3p12p14 loss in cervical cancer by integrative genomic profiling. Journal of Pathology (ISSN 0022-3417). 230(1) pp 59-69. doi: 10.1002/path.4168. 2013.

2012

Bøhn, Siv Kjølsrud; Russnes, Kjell Magne; Sakhi, Amrit Kaur; Thoresen, Magne; Holden, Marit; Moskaug, Jan Øivind; Myhrstad, Mari Charlotte; Olstad, Ole Kristoffer; Smeland, Sigbjørn; Blomhoff, Rune. Stress associated gene expression in blood cells is related to outcome in radiotherapy treated head and neck cancer patients. BMC Cancer (ISSN 1471-2407). 12 doi: 10.1186/1471-2407-12-426. 2012.

Halle, Cathinka Lønning; Andersen, Erlend K F; Lando, Malin; Aarnes, Eva-Katrine; Hasvold, Grete; Holden, Marit; Syljuåsen, Randi G.; Sundfør, Kolbein; Kristensen, Gunnar S Balle; Holm, Ruth; Malinen, Eirik; Lyng, Heidi. Hypoxia-induced gene expression in chemoradioresistant cervical cancer revealed by dynamic contrast enhanced MRI. Cancer Research (ISSN 0008-5472). 72(20) pp 5285-5295. doi: 10.1158/0008-5472.CAN-12-1085. 2012.

Aldrin, Magne; Holden, Marit; Guttorp, Peter; Skeie, Ragnhild Bieltvedt; Myhre, Gunnar; Berntsen, Terje Koren. Bayesian estimation of climate sensitivity based on a simple climate model fitted to observations of hemispheric temperatures and global ocean heat content. Environmetrics (ISSN 1180-4009). 23(3) pp 253-271. doi: 10.1002/env.2140. 2012.

Omair, Ahmad; Lie, Benedicte Alexandra; Reikerås, Olav; Holden, Marit; Brox, Jens Ivar. Genetic contribution of catechol-O-methyltransferase variants in treatment outcome of low back pain: a prospective genetic association study. BMC Musculoskeletal Disorders (ISSN 1471-2474). 13 doi: 10.1186/1471-2474-13-76. 2012.

2011

Sandve, Geir Kjetil; Gundersen, Sveinung; Rydbeck, Halfdan; Glad, Ingrid Kristine; Holden, Lars; Holden, Marit; Liestøl, Knut; Clancy, Trevor; Drabløs, Finn; Ferkingstad, Egil; Johansen, Morten; Nygaard, Vegard; Tøstesen, Eivind; Frigessi, Arnoldo; Hovig, Eivind. The differential disease regulome. BMC Genomics (ISSN 1471-2164). 12 pp 353. doi: 10.1186/1471-2164-12-353. 2011. Fulltekst

Halle, Cathinka Lønning; Lando, Malin; Svendsrud, Debbie Hege; Clancy, Trevor; Holden, Marit; Sundfør, Kolbein; Kristensen, Gunnar S Balle; Holm, Ruth; Lyng, Heidi. Membranous Expression of Ectodomain Isoforms of the Epidermal Growth Factor Receptor Predicts Outcome after Chemoradiotherapy of Lymph Node-Negative Cervical Cancer. Clinical Cancer Research (ISSN 1078-0432). 17(16) pp 5501-5512. doi: 10.1158/1078-0432.CCR-11-0297. 2011.

Jemtland, Rune; Holden, Marit; Reppe, Sjur; Olstad, Ole Kristoffer; Reinholt, Finn P.; Gautvik, Vigdis Teig; Refvem, Hilde; Frigessi, Arnoldo; Houston, Brian; Gautvik, Kaare M. Molecular Disease Map of Bone Characterizing the Postmenopausal Osteoporosis Phenotype. Journal of Bone and Mineral Research (ISSN 0884-0431). 26(8) pp 1793-1801. doi: 10.1002/jbmr.396. 2011.

2010

Sandve, Geir Kjetil; Gundersen, Sveinung; Rydbeck, Halfdan; Glad, Ingrid Kristine; Holden, Lars; Holden, Marit; Liestøl, Knut; Clancy, Trevor; Ferkingstad, Egil; Johansen, Morten; Nygaard, Vegard; Tøstesen, Eivind; Frigessi, Arnoldo; Hovig, Eivind. The Genomic HyperBrowser: inferential genomics at the sequence level. Genome Biology (ISSN 1465-6906). 11(12) doi: 10.1186/gb-2010-11-12-r121. 2010. Prosjekt Arkiv

Reppe, S; Refvem, Hilde; Gautvik, VT; Olstad, OK; Høvring, Per Ivar; Reinholt, Finn P.; Holden, Marit; Frigessi, Arnoldo; Jemtland, R; Gautvik, KM. Eight genes are highly associated with BMD variation in postmenopausal Caucasian women. Bone (ISSN 8756-3282). 46(3) pp 604-612. doi: 10.1016/j.bone.2009.11.007. 2010.

Bøhn, Siv Kjølsrud; Myhrstad, Mari Charlotte; Thoresen, Magne; Holden, Marit; Karlsen, Anette; Tunheim, Siv Haugen; Erlund, Iris; Svendsen, Mette; Seljeflot, Ingebjørg; Moskaug, Jan Øivind; Duttaroy, Asim K.; Laake, Petter; Arnesen, Harald; Tonstad, Serena; Collins, Andrew Richard; Drevon, Christian A; Blomhoff, Rune. Blood cell gene expression associated with cellular stress defense is modulated by antioxidant-rich food in a randomised controlled clinical trial of male smokers. BMC Medicine (ISSN 1741-7015). 8 doi: 10.1186/1741-7015-8-54. 2010.

2009

Lando, M; Holden, Marit; Bergersen, LC; Glad, Ingrid K; Kristensen, GB; Lyng, H; Svendsrud, Debbie H.; Stokke, Trond; Sundfør, Kolbein. Gene Dosage, Expression, and Ontology Analysis Identifies Driver Genes in the Carcinogenesis and Chemoradioresistance of Cervical Cancer. PLoS Genetics (ISSN 1553-7390). 5(11) doi: 10.1371/journal.pgen.1000719. 2009.

Holden, Lars; Hauge, Ragnar; Holden, Marit. ADAPTIVE INDEPENDENT METROPOLIS-HASTINGS. The Annals of Applied Probability (ISSN 1050-5164). 19(1) pp 395-413. doi: 10.1214/08-AAP545. 2009. Fulltekst

2008

Nygaard, V; Liu, Fang; Holden, Marit; Kuo, Winston P.; Trimarchi, Jeff; Ohno-Machado, Lucila; Cepko, Connie L.; Frigessi, Arnoldo; Glad, Ingrid K.; Wiel, Mark A. van de; Hovig, Eivind; Lyng, H. Validation of oligoarrays for quantitative exploration of the transcriptome. BMC Genomics (ISSN 1471-2164). 9 doi: 10.1186/1471-2164-9-258. 2008.

Holden, Marit; Deng, Shiwei; Wojnowski, Leszek; Kulle, Bettina. GSEA-SNP: applying gene set enrichment analysis to SNP data from genome-wide association studies. Bioinformatics (ISSN 1367-4803). 24(23) pp 2784-2785. doi: 10.1093/bioinformatics/btn516. 2008.

2007

Fjærli, Hans Olav; Bukholm, G; Skjæret, Camilla; Holden, Marit; Nakstad, B. Cord blood gene expression in infants hospitalized with respiratory syncytial virus bronchiolitis. Journal of Infectious Diseases (ISSN 0022-1899). 196 doi: 10.1086/519168. 2007.

2006

Fjærli, Hans Olav; Bukholm, Geir; Krog, Anne; Skjæret, Camilla; Holden, Marit; Nakstad, B. Whole blood gene expression in infants with respiratory syncytial virus bronchiolitis. BMC Infectious Diseases (ISSN 1471-2334). 6 doi: 10.1186/1471-2334-6-175. 2006.

Berner, Jeanne-Marie; Muller, Christoph Rainer; Holden, Marit; Wang, Junbai; Hovig, Eivind; Myklebost, Ola. Sampling effects on gene expression data from a human tumour xenograft. Scandinavian Journal of Laboratory Animal Science (ISSN 0901-3393). 33 pp 17-34. 2006.

2005

Nygaard, Vigdis; Holden, Marit; Løland, Anders; Langaas, Mette; Myklebost, Ola; Hovig, Eivind. Limitations of mRNA amplification from small-size cell samples. BMC Genomics (ISSN 1471-2164). (6) pp 147. doi: 10.1186/1471-2164-6-147. 2005.

Frigessi, Arnoldo; van de Wiel, Mark; Holden, Marit; Svendsrud, Debbie H.; Glad, Ingrid Kristine; Lyng, Heidi. Genome-wide estimation of transcript concentrations from spotted cDNA microarray data. Nucleic Acids Research (NAR) (ISSN 0305-1048). 33(17) doi: 10.1093/nar/gni141. 2005.

Frigessi, Arnoldo; Holden, Marit; Marshall, Clare; Viljugrein, Hildegunn; Stenseth, Nils Christian; Holden, Lars; Ageyev, V; Klassovskiy, NL; Ageyev, Vladimir; Klassovskiy, Nikolay. Bayesian population dynamics of interacting species: Great gerbils and fleas in Kazakhstan. Biometrics (ISSN 0006-341X). 61 2005.

2004

Haug, O; Myklebost, Ola; Aldrin, M; Østenstad, Bjørn; Holden, M; Frigessi, Arnoldo; Sioud, Mouldy; Cekaite, Lina; Hovig, Eivind. Analysis of the humoral immune response to immunoselected phage-displayed peptides by a microarray-based method. Proteomics (ISSN 1615-9853). 4 pp 2572-2582. 2004.

2003

Nygaard, Vigdis; Løland, Anders; Holden, Marit; Langaas, Mette; Rue, Håvard; Liu, Fang; Myklebost, Ola; Fodstad, Øystein; Hovig, Eivind; Smith-Sørensen, Birgitte. Effects of mRNA amplification on gene expression ratios in cDNA experiments estimated by analysis of variance. BMC Genomics (ISSN 1471-2164). 4(11) doi: 10.1186/1471-2164-4-11. 2003. Sammendrag Sammendrag

Aldrin, Magne; Holden, Marit; Schweder, Tore. Comment on Cowling's "Spatial Methods for Line Transect Surveys". Biometrics (ISSN 0006-341X). 59 pp 186-188. 2003.

1998

Holden, Marit; Solberg, Anne H. Schistad; Solberg, Rune. Wet snow-cover mapping by C- and L-band polarimtric SAR. Ukjent 1998.

Holden, Marit; Solberg, Anne H. Schistad; Solberg, Rune. Wet snow-cover mapping by C- and L-band polarimetric SAR. Ukjent pp 1533-1537. 1998. Fulltekst

1997

Holden, Marit. Examples of use of cut to shorten proofs. Ukjent 1997.

1995

Holden, Marit; Steen, Erik; Lundervold, Arvid. Segmentation and visualization of brain lesions in multispectral magnetic resonance images. Computerized Medical Imaging and Graphics (ISSN 0895-6111). 19(2) pp 171-173. 1995.

Eikvil, Line; Aas, Kjersti; Holden, Marit. Automatic recognition of character strings in maps. Ukjent 1995.

1993

Holden, Marit; Eikvil, Line; Storvik, Geir. Methods for updating of model parameters applied within the area of symbol recognition. Ukjent 1993.

1991

Holden, Marit. Weak logic theory. Theoretical Computer Science (ISSN 0304-3975). 79 pp 295-321. 1991.

Academic literature review

2009

Eikvil, Line; Holden, Marit; Huseby, Ragnar Bang. Adaptive registration of remote sensing images using supervised learning. Photogrammetric Engineering and Remote Sensing (ISSN 0099-1112). 75(11) pp 1297-1306. 2009. Fulltekst

Academic chapter/article/Conference paper

2020

Lund, Eiliv; Holden, Marit; Thalabard, Jean-Christophe; Rasmussen Busund, Lill-Tove; Snapkov, Igor; Holden, Lars. Signals of Death - Post-Diagnostic Single Gene Expression Trajectories in Breast Cancer - A Proof of Concept. In: Advancing Systems Epidemiology in Cancer - Exploring Trajectories of Gene Expression. (ISBN 978-82-15-04119-3). pp 141-162. doi: 10.18261/9788215041193-2020-09. 2020. Arkiv

Holden, Marit; Holden, Lars. Statistics of Sparsely Sampled Curves. In: Advancing Systems Epidemiology in Cancer - Exploring Trajectories of Gene Expression. (ISBN 978-82-15-04119-3). pp 95-109. doi: 10.18261/9788215041193-2020-06. 2020. Fulltekst

2006

van de Wiel, Mark; Holden, Marit; Glad, Ingrid Kristine; Lyng, Heidi; Frigessi, Arnoldo. Bayesian process-based modeling of two-channel microarray experiments estimating absolute mRNA concentrations. In: Bayesian Inference for Gene Expression and Proteomics. (ISBN 978-0-521-86092-5). pp 75-97. 2006.

Academic lecture

2022

Vedal, Amund Hansen; Eikvil, Line; Holden, Marit; Gilbert, Andrew. Context-Aware Landmark Detection for 2D Cardiac Ultrasound using Graph Convnet. GEVU Research Day; Teams, 5/23/2022.

2021

Ordonez, Alba; Eikvil, Line; Holden, Marit. Learning motion of seismic structures without human labelling. Visual Intelligence Days 2021; Oslo, 10/19/2021 - 10/20/2021.

2014

Eikvil, Line; Holden, Marit. Evaluation of binary descriptors for fast and fully automatic identification. International Conference on Pattern Recognition; Stockholm, 8/24/2014 - 8/28/2014.

2011

Günther, Clara-Cecilie; Tvete, Ingunn Fride; Holden, Marit. Statistics Forelesning kurs. Introduction to Microarray Technology; Oslo, 5/10/2011.

2010

Aldrin, Magne; Holden, Marit; Guttorp, Peter. Bayesian estimation of the climate sensitivity based on a simple climate model fitted to global temperature observations. International Workshop on Modern Statistics for Climate Research; Oslo, 2/1/2010 - 2/2/2010.

Reppe, Sjur; Holden, Marit; Gautvik, Vigdis; Datta, Harish K; Gautvik, Kaare M. Postmenopausal BMD Variation is Strongly Associated with Subsets of MicroRNAs and Other Non-coding RNAs (ncRNAs) Expression Levels. The American Society for Bone and Mineral Research, Annual Meeting, 2010, Toronto, Ontario, Canada, 10/16/2010.

2009

Eikvil, Line; Holden, Marit; Huseby, Ragnar Bang. A system for adaptive image registration based on supervised learning. ESA-EUSC-JRC 2009, Sixth Conferenece on Image Information Mining, Madrid, 3-5 Nov. 2009, 11/4/2009. Fulltekst

2008

Bøhn, Siv Kjølsrud; Myhrstad, Mari Charlotte; Thoresen, Magne; Holden, Marit; Tunheim, Siv Haugen; Karlsen, Anette; Svendsen, Mette; Seljeflot, Ingebjørg; Moskaug, Jan Øivind; Duttaroy, Asim K.; Laake, Petter; Drevon, Christian A; Arnesen, Harald; Tonstad, Serena; Collins, Andrew Richard; Blomhoff, Rune. Plant food phytochemicals modulate gene expression in human blood cells. 5th European nutrigenomics conference; potsdam, 9/2/2008 - 9/5/2008.

Eikvil, Line; Holden, Marit; Huseby, Ragnar Bang. Adaptive Co-Registration of Remote Sensing Images. ESA-EUSC 2008: Image Information Mining: pursuing automation of geospatial intelligence for environm, 3/6/2008. Fulltekst

Eikvil, Line; Koren, Hans; Holden, Marit. Vehicle Detection in High-Resolution Satellite Images. ESA-EUSC 2008: Image Information Mining: pursuing automation of geospatial intelligence for environm, 3/6/2008. Fulltekst

2006

Holden, Marit. Steps in a microarray study. Seminar on microarray technologies arranged by the Rikshospitalet-Radiumhospitalet Medical Center; Oslo, 11/24/2006.

Holden, Marit. Parallelization of TransCount - making MCMC parallel for huge datasets. High Performance Computing for Statistical Inference, Dublin, August 23-25, 2006, 8/23/2006.

2005

Holden, Marit. Model-based estimation of transcript concentrations from spotted microarray data. 25th European Meeting of Statisticians, July 24-28, 2005, Oslo, Norway, 7/24/2005.

Holden, Marit. Logic regression used for statistical analysis of SNP data obtained in genetic association studies. Talk at UMB, Ås, 6/14/2005.

Holden, Marit. Experimental design and non-random variation. Lecture at the course \Micorarray data analysis\" at the Norwegian Radium Hospital, Oslo,", 5/31/2005.

2004

Holden, Marit. Introduction to experimental design and statistical analysis in genetic association studies. Reach-out day with theme: Statistical service on experimental design and analysis of SNP experiments, 5/1/2004.

Holden, Marit. Experimental design, repeated measurements and control spots. Course in analysis of microarray data; Bergen, 2/3/2004.

Holden, Marit. Experimental design and non-random variation. Introduction to Microarray Technology; The Norwegian Radium Hospital, Oslo, 11/29/2004.

2003

Holden, Marit. Forsøksdesign for cDNA mikromatriser. Foredrag. Ahus (Universitetssykehuset i Akershus), 12/1/2003.

Holden, Marit. Experimental design, repeated measurements and controls. User course in microarray technology; The Norwegian Radium Hospital, Oslo, 5/14/2003.

Holden, Marit. Experimental design, repeated measurements and control spots. User course in microarray technology; The Norwegian Radium Hospital, Oslo, 5/14/2003.

Holden, Marit. Estimation of absolute mRNA concentrations from cDNA microarrays. Norevent's 3rd Lysebu meeting, 9/1/2003.

2002

Holden, Marit; Løland, Anders; Langaas, Mette; Rue, Håvard; Nygaard, Vigdis; Myklebost, Ola; Hovig, Eivind. Investigating the linearity of an RNA-amplification protocol using analysis of variance on data from cDNA microarray experiments. 19th Nordic Conference on Mathematical Statistics, 6/9/2002.

Holden, Marit. Bildeanalyse av mikromatrisedata. NOBIMs industriseminar i bildeanalyse. Tønsberg, 10/24/2002.

2000

Solberg, Rune; Holden, Marit. A new method for sub-pixel snow-cover mapping using hyperspectral imagery. NOBIM-konferansen, 6/6/2000. Fulltekst

1998

Holden, Marit. Segmentation and Visualization of Brain Lesions in Multispectral Magnetic Resonance Images. Workshop on Models and Methods for Spatial and Spatio-temporal Data, München,, 10/19/1998.

1993

Holden, Marit; Eikvil, Line; Storvik, Geir Olve. Methods for updating of model parameters applied within the area of symbol recognition. The 8th SCIA Conference; Tromsø, Norway, 1/1/1993.

1992

Holden, Marit. Oppdatering av parameterestimater. Bildebehandlingsseminar; Institutt for Informatikk, Universitetet i Oslo, 11/9/1992.

Abstract

2018

Gautvik, Kaare M; Günther, Clara-Cecilie; Yazdani, J.; Lindalen, Einar; Valland, Haldor; Gautvik, Vigdis Teig; Olstad, Ole Kristoffer; Holden, Marit; Utheim, Tor Paaske; Reppe, Sjur. Distinct subsets of non-coding RNAs, including miRNAs, are associated with BMD in stressed and unstressed bone. Journal of Bone and Mineral Research. 33 pp 228. 2018. Omtale

Lecture

2019

Eikvil, Line; Holden, Marit. Maskinlæring i mammografiprogrammet. Fagkonferansen i mammografiprogrammet, 3/28/2019 - 3/29/2019.

2018

Günther, Clara-Cecilie; Holden, Marit. Advising in a research institute: Challenges and lessons learned. ADVICE 2018, 11/10/2018 - 11/11/2018.

2017

Nøst, Therese Haugdahl; Holden, Marit; Bøvelstad, Hege; Rylander, Charlotta; Lund, Eiliv; Sandanger, Torkjel M. Subtle alterations in gene expression detected in blood prior to metastatic lung cancer diagnosis – the NOWAC study. The 24th Norwegian Epidemiology Conference; Tromsø, 11/7/2017 - 11/8/2017.

Poster

2022

Dahl, Fredrik Andreas; Holden, Marit; Brautaset, Olav; Eikvil, Line. A two-stage mammography classification model using XAI for ROI detection. Visual Intelligence days 2022; Olavsgaard, 9/28/2022 - 9/29/2022.

Dahl, Fredrik Andreas; Holden, Marit; Brautaset, Olav; Eikvil, Line. A mammography classification model trained from image labels only. NLDL 2022; Online, 1/10/2022.

Vedal, Amund Hansen; Eikvil, Line; Holden, Marit. Context-Aware Landmark Detection for 2D Cardiac Ultrasound using a Graph Convolution Network. Northern Lights Deep Learning conference, 1/10/2022 - 1/12/2022.

2019

Olsen, Karina Standahl; Holden, Marit; Talabard, Jean-Christophe; Busund, Lill-Tove Rasmussen; Lund, Eiliv; Holden, Lars. Post-diagnostic blood gene expression profiles in breast cancer - NOWAC Post-genome Cohort. NOFE conference; Oslo, 11/13/2019 - 11/14/2019.

2018

Jareid, Mie Linnea; Snapkov, Igor; Holden, Marit; Lund, Eiliv; Nøst, Therese Haugdahl. Transcriptional profiles of whole blood before a diagnosis of ovarian cancer. NOFE-konferansen 2018; Trondheim, 11/14/2018 - 11/15/2018.

Gautvik, Kaare M; Günther, Clara-Cecilie; Yazdani, J.; Lindalen, Einar; Valland, Haldor; Gautvik, Vigdis Teig; Olstad, Ole Kristoffer; Holden, Marit; Utheim, Tor Paaske; Reppe, Sjur. Distinct subsets of non-coding RNAs, including miRNAs, are associated with BMD in stressed and unstressed bone. ASBMR Annual meeting 2018; Montreal, 9/28/2018 - 10/1/2018.

2016

Olsen, Karina Standahl; Holden, Lars; Bøvelstad, Hege; Plancade, Sandra; Günther, Clara-Cecilie; Thalabard, Jean-Christophe; Holden, Marit; Lund, Eiliv. Blood gene expression profiles reflect temporality and clinical parameters up to six years before breast cancer diagnosis – The Norwegian. Norsk Forening for epidemiologi; Bergen, 9/26/2016 - 9/27/2016.

Olsen, Karina Standahl; Holden, Lars; Bøvelstad, Hege; Plancade, Sandra; Günther, Clara-Cecilie; Thalabard, Jean-Christophe; Holden, Marit; Lund, Eiliv. Blood gene expression profiles reflect temporality and clinical parameters up to six years before breast cancer diagnosis – The Norwegian Women and Cancer Post-genome cohort (Kvinner og Kreft-studien). 1st International NTNU Symposium on clinical biomarkers of cancer; Trondheim, 6/16/2016 - 6/17/2016.

2012

Skeie, Ragnhild Bieltvedt; Berntsen, Terje Koren; Aldrin, Magne; Holden, Marit; Myhre, Gunnar. Constraining climate sensitivity by observations and models. European Geosciences Union General Assembly 2012; Wien, 4/22/2012 - 4/27/2012.

2009

Reppe, Sjur; Refvem, Hilde; Gautvik, Vigdis Teig; Olstad, Ole Kristoffer; Høvring, Per Ivar; Reinholt, Finn P.; Holden, Marit; Frigessi, Arnoldo; Jemtland, Rune; Gautvik, Kaare M. Eight Genes are Highly Associated with BMD variation in Postmenopausal Caucasian Women. 31th Annual meeting of the American Society for Bone and Mineral Research Denver Colorado 2009, 9/11/2009 - 9/15/2009.

2005

Frigessi, Arnoldo; Wiel, Mark A. van de; Holden, Marit; Svendsrud, Debbie H.; Glad, Ingrid K.; Lyng, Heidi. Absolute mRNA concentrations from MA-data. 8th International Meeting of the Microarray Gene Expression Data Society, 9/11/2005.

Report

2022

Eikvil, Line; Dahl, Fredrik Andreas; Holden, Marit; Brautaset, Olav; Hofvind, Solveig; Aglen, Camilla Flåt; Larsen, Marthe. Procedures for mammographic screening with machine learning. Norsk Regnesentral. NR-notat SAMBA/17/22. pp 16. 2022.

Dahl, Fredrik Andreas; Holden, Marit; Brautaset, Olav; Eikvil, Line. Machine learning for screening mammography. Norsk Regnesentral. NR-notat SAMBA/18/22. pp 33. 2022.

Ordonez, Alba; Holden, Marit. Learning motion of seismic structures without human labelling. Norsk Regnesentral. NR-notat SAMBA/10/22. pp 22. 2022.

2021

Eikvil, Line; Holden, Marit; Ordonez, Alba. Machine learning for image-based interpretation of non-verbal communication. Norsk Regnesentral. NR-notat SAMBA/04/21. pp 37. 2021.

Eikvil, Line; Holden, Marit; Holden, Lars; Brautaset, Olav. Machine learning for screening mammography. Norsk Regnesentral. NR-notat SAMBA/05/21. pp 52. 2021.

Eikvil, Line; Holden, Marit; Ordonez, Alba. Machine learning for image-based interpretation of non-verbal communication - Initial version. Norsk Regnesentral. NR-notat SAMBA/04/21. pp 37. 2021.

2020

Eikvil, Line; Waldeland, Anders U.; Barker, Daniel Martin L; Holden, Marit; Hauge, Ragnar; Salberg, Arnt Børre. Deep learning in seismic interpretations - Development and experiments 2020. Norsk Regnesentral. NR-notat SAMBA/51/20. pp 26. 2020.

Eikvil, Line; Holden, Marit; Holden, Lars; Brautaset, Olav. Machine learning for screening mammography - Initial analyses on a first limited dataset. Norsk Regnesentral. NR-notat SAMBA/16/20. pp 45. 2020.

2019

Eikvil, Line; Holden, Marit; Hauge, Ragnar; Kvernelv, Vegard Berg. Estimation of rock cuttings size from images. Norsk Regnesentral. NR-notat SAND/02/2019. pp 43. 2019.

Eikvil, Line; Waldeland, Anders U.; Holden, Marit; Salberg, Arnt Børre; Hauge, Ragnar; Barker, Daniel Martin L. Deep learning in seismic interpretation. Norsk Regnesentral. NR-notat SAMBA/49/19. pp 39. 2019.

Eikvil, Line; Holden, Marit. Deep learning for ultrasound images - next steps. Norsk Regnesentral. NR-notat SAMBA/48/19. pp 55. 2019.

Lund, Eiliv; Holden, Marit; Holden, Lars. BLOBREC – a blood-based test for breast cancer Analyses of test properties in the years before and after diagnosis. Norsk Regnesentral. NR-notat SAMBA/27/19. pp 17. 2019. Fulltekst

Holden, Marit; Holden, Lars. Parity and breast cancer Gene expression in blood, normal and tumor tissue. Norsk Regnesentral. NR-notat SAMBA/24/19. pp 30. 2019.

2018

Eikvil, Line; Holden, Marit. Deep learning for ultrasound images. Norsk Regnesentral. NR-notat SAMBA/24/18. pp 92. 2018.

Holden, Marit; Holden, Lars. Parity and breast cancer - Gene expression in blood, normal and tumor tissue. Norsk Regnesentral. NR-notat SAMBA/02/18. pp 25. 2018.

2016

Løland, Anders; Holden, Marit. Smoothing of forward curves. Norsk Regnesentral. NR-notat SAMBA/25/16. pp 22. 2016.

Holden, Marit; Holden, Lars. Detecting weak gene expression signals in blood before diagnosis of cancer - Comparing breast, ovarian and lung cancer. Norsk Regnesentral. NR-notat SAMBA/28/16. pp 32. 2016.

Eikvil, Line; Holden, Marit. Fjerning av støy fra historiske dokumenter. Norsk Regnesentral. NR-notat SAMBA/24/16. pp 38. 2016.

Holden, Marit; Holden, Lars. Parity, breast cancer and gene expression. Norsk Regnesentral. NR-notat SAMBA/19/16. pp 25. 2016.

Holden, Marit; Holden, Lars. Analysis of gene expression in blood before diagnosis of ovarian cancer - Different statistical methods. Norsk Regnesentral. NR-notat SAMBA/10/16. pp 36. 2016. Fulltekst

Holden, Marit; Holden, Lars. Statistical analysis of gene expression in blood before diagnosis of breast cancer. Norsk Regnesentral. NR-notat SAMBA/07/16. pp 39. 2016. Fulltekst

2015

Holden, Marit; Holden, Lars. Blood-based diagnostic tests for breast cancer:Additional subgroup analyses of the BLOBREC test. Norsk Regnesentral. NR-notat SAMBA/44/15. pp 30. 2015.

Holden, Marit; Günther, Clara-Cecilie; Holden, Lars. Verification of a blood-based test for breast-cancer (BLOBREC) - Distinguishing breast-cancer patients from population-based controls. Norsk Regnesentral. NR-notat SAMBA/33/15. pp 36. 2015. Fulltekst

Eikvil, Line; Holden, Marit. Verifikasjon av strekkoder. Norsk Regnesentral. NR-notat SAMBA/36/15. pp 41. 2015.

Eikvil, Line; Holden, Marit. Utvalg av deskriptorer for oppbygging av database. Norsk Regnesentral. NR-notat SAMBA/25/15. pp 27. 2015.

Eikvil, Line; Holden, Marit. Bruk av fargedeskriptorer for gjenkjenning av ukeblader. Norsk Regnesentral. NR-notat SAMBA/19/15. pp 30. 2015.

Lund, Eiliv; Holden, Lars; Bøvelstad, Hege; Plancade, Sandra Caroline; Mode, Nicolle; Günther, Clara-Cecilie; Nuel, Gregory; Thalabard, Jean-Christophe; Holden, Marit. Curve groups and breast cancer. Norsk Regnesentral. NR-notat SAMBA/18/15. pp 32. 2015.

2014

Holden, Marit; Holden, Lars. Statistical analysis of gene expression data related to breast cancer diagnosis. Norsk Regnesentral. NR-notat SAMBA/19/14. pp 74. 2014. Fulltekst

Holden, Lars; Eikvil, Line; Holden, Marit; Boudko, Svetlana. Historisk informasjon fra avisarkiv. Norsk Regnesentral. NR-notat SAMBA 51/14. pp 41. 2014.

Günther, Clara-Cecilie; Holden, Marit; Holden, Lars. Preprocessing of gene-expression data related to breast cancer diagnosis – extended version. Norsk Regnesentral. NR-notat SAMBA/32/14. 2014.

Günther, Clara-Cecilie; Holden, Marit; Holden, Lars. Preprocessing of gene-expression data related to breast cancer diagnosis. Norsk Regnesentral. NR-notat SAMBA/35/14. pp 41. 2014.

Eikvil, Line; Holden, Marit. Robust klassifikasjon av ukeblader. Norsk Regnesentral. NR-notat SAMBA/17/14. pp 18. 2014.

2013

Eikvil, Line; Holden, Marit. Descriptors and matching for real-time recognition of planar and curved objects. Norsk Regnesentral. NR-notat SAMBA/3/13. pp 39. 2013.

Eikvil, Line; Holden, Marit. Metoder og programmer for gjenkjenning av ukeblader. Norsk Regnesentral. NR-notat SAMBA/19/13. pp 18. 2013.

2012

Eikvil, Line; Holden, Marit. Detectors and descriptors for real-time recognition of planar objects. Norsk Regnesentral. NR-notat SAMBA/03/12. pp 23. 2012.

Holden, Marit; Eikvil, Line. Detecting beads in time series of DNA-sequencing images. Norsk Regnesentral. NR-notat SAMBA/57/12. pp 35. 2012.

Holden, Marit; Glad, Ingrid Kristine; Hauge, Håvard Hildeng; Hovig, Eivind; Liestøl, Knut. Image restoration and analysis of biomolecular radioactivity images II. Norsk Regnesentral. NR-notat SAMBA/11/12. pp 48. 2012.

Løland, Anders; Holden, Marit. ProPrice Interface Specification. Norsk Regnesentral. NR-notat SAMBA/29/12. pp 19. 2012.

Aas, Kjersti; Holden, Marit. Importance Sampling from DNB's Credit Risk Model. Norsk Regnesentral. NR-notat SAMBA/31/12. pp 30. 2012.

2011

Kvaal, Sigrid Ingeborg; Eikvil, Line; Holden, Marit. Bildeanalyse av røntgenbilder til hjelp for aldersvurdering. Norsk Regnesentral. NR-notat SAMBA/43/11. pp 28. 2011. Fulltekst

Holden, Marit; Aas, Kjersti. Parallellisering av Totalrisiko-programmet ved hjelp av GPU. Norsk Regnesentral. NR-notat SAMBA/13/2011. pp 14. 2011.

Holden, Marit; Aas, Kjersti. Parallellisering av simulering fra vines. Norsk Regnesentral. NR-notat SAMBA/18/2011. pp 13. 2011.

Eikvil, Line; Holden, Marit. Efficient search for biomedical information. Norsk Regnesentral. NR-notat SAMBA/54/11. pp 45. 2011.

2010

Holden, Marit; Aas, Kjersti. Parallellisering av Totalrisiko-programmet. Norsk Regnesentral. NR-notat SAMBA/43/10. pp 14. 2010.

Holden, Marit; Aas, Kjersti. Parallellisering av Kredittrisiko-programmet. Norsk Regnesentral. NR-notat SAMBA/49/10. pp 16. 2010.

2009

Eikvil, Line; Holden, Marit; Huseby, Ragnar Bang. MIR - Multiple Image Registration, Technical Documentation. Norsk Regnesentral. NR-notat SAMBA/12/09. pp 160. 2009.

Eikvil, Line; Holden, Marit; Huseby, Ragnar Bang. MIR - Multiple Image Registration, Software Documentation. Norsk Regnesentral. NR-notat SAMBA/11/09. pp 138. 2009.

2008

Amlien, Jostein; Holden, Marit; Larsen, Siri Øyen; Trier, Øivind Thorvald Due; Solberg, Rune. CultSearcher – Software Guide, version 2. Computer-assisted detection of potential cultural heritage sites. Norsk Regnesentral. NR-notat SAMBA/15/08. pp 42. 2008. Fulltekst

Holden, Marit; Glad, Ingrid Kristine; Hauge, Håvard Lilledalen; Liestøl, Knut. Image restoration and analysis of biomolecular radioactivity images. Norsk Regnesentral. NR-notat SAMBA/27/08. pp 34. 2008. Fulltekst

2007

Amlien, Jostein; Holden, Marit; Larsen, Siri Øyen; Solberg, Rune. CultSearcher - Computer-assisted detection of potential cultural heritage sites. Norsk Regnesentral. NR-notat SAMBA/39/07. pp 39. 2007.

Aurdal, Lars; Eikvil, Line; Koren, Hans; Hanssen, Jan Usterud; Johansen, Kjell; Holden, Marit. Road Traffic Snapshot. Norsk Regnesentral. Report at the Norwegian Computing Center 1015. (ISBN 978-82-539-0525-9) pp 71. 2007. Fulltekst

2004

Frigessi, Arnoldo; Van der Wiel, Mark; Holden, Marit; Glad, Ingrid Kristine; Lyng, Heidi; Wiel, Mark A. van de; Glad, Ingrid K.. Model-based estimation of transcript concentrations from spotted microarray data. Norsk Regnesentral. Report at the Norwegian Computing Center 999. (ISBN 82-539-0507-6) pp 40. 2004. Fulltekst Fulltekst

Follestad, Turid; Langaas, Mette; Rue, Håvard; Holden, Marit; Løland, Anders. glme: a C-program for parameter estimation using Gibbs-sampling in large linear mixed-effects models, with applications to DNA microarray data. Department of Mathematical Sciences, NTNU. Preprint Series in Statistics 2/2004. pp 20. 2004. Fulltekst

2003

Marshall, Clare; Frigessi, Arnoldo; Holden, Marit; Viljugrein, Hildegunn; Stenseth, Nils Christian; Holden, Lars; Ageyev, Vladimir; Klassovskiy, Nikolay. A Bayesian model for the population dynamics of two interacting species, with application to great gerbils and fleas in south-eastern Kazakhstan. Norsk Regnesentral. Report at the Norwegian Computing Center 994. (ISBN 82-539-0501-7) pp 19. 2003.

Holden, Marit; Haug, Ola. Experimental design and statistical analysis of SNP data obtained in genetic association studies. Norsk Regnesentral. NR-notat SAMBA/28/03. pp 32. 2003. Fulltekst

2001

Aldrin, Magne; Holden, Marit; Schweder, Tore. Estimation of a Neyman-Scott process from line transect data by a one-dimensional K-function. Norsk Regnesentral. NR-notat SAMBA/18/01. pp 11. 2001. Fulltekst

2000

Marshall, Clare; Frigessi, Arnoldo; Stenseth, Nils Christian; Holden, Marit; Ageyev, Vladimir; Klassovskiy, Nikolay. Plague in Kazakhstan: a bayesian model for the temporal dynamics of a vector-transmitted infectious disease. Norsk Regnesentral. Report at the Norwegian Computing Center 959. (ISBN 82-539-0463-0) pp 20. 2000.

Huseby, Ragnar Bang; Holden, Marit. Locating pipes in cross-profiles - documentation of methods and results. Norsk Regnesentral. NR-notat SAMBA/21/00. pp 23. 2000.

Huseby, Ragnar Bang; Holden, Marit. Locating pipes in cross-profiles - documentation of C++ code. Norsk Regnesentral. NR-notat SAMBA/22/00. pp 29. 2000.

Holden, Marit; Solberg, Rune. SnowStar - Teknisk dokumentasjon for SnowStar Server. Norsk Regnesentral. NR-notat SAMBA/29/00. pp 18. 2000.

Holden, Marit; Solberg, Rune. SnowStar - Brukerveiledning for SnowStar Server. Norsk Regnesentral. NR-notat SAMBA/28/00. pp 18. 2000.

1999

Eikvil, Line; Holden, Marit; Solberg, Anne H. Schistad. Seismic Attribute Analysis, Part IV. Norsk Regnesentral. NR-notat SAMBA/17/99. pp 76. 1999.

1998

Solberg, Anne H. Schistad; Holden, Marit; Storvik, Geir; Teigland, André; Møller-Holst, Johan. Seismic image analysis: 3D texture attributes and classification - part III. Norsk Regnesentral. NR-notat SAMBA/21/98. 1998.

Holden, Marit; Solberg, Anne H. Schistad; Solberg, Rune. Snow mapping by multifrequency polarimetric SAR - An investigation of EMISAR data from the EMAC'95 snow campaign in Norway. 934. (ISBN 82-539-0417-7) 1998.

1997

Holden, Marit; Solberg, Anne H. Schistad; Storvik, Geir; Teigland, André; Møller-Holst, Johan; Berge, Anker M.. Seismic image analysis: 3D texture attributes and classification - part II. Norsk Regnesentral. NR-notat BILD/07/97. pp 60. 1997.

1994

Holden, Marit; Maartmann-Moe, Erling. Automatic interpretation of incoming mail in administrative environments. Norsk Regnesentral. NR-notat BILD/04/94. pp 21. 1994.

Holden, Marit. Segmentation of MR images of the head using a hierarchical method. 881. (ISBN 82-539-0377-4) pp 25. 1994.

1993

Holden, Marit; Steen, Erik; Lundervold, Arvid. Segmentation and visualization of brain lesions in multispectral magnetic resonance images. Norsk Regnesentral. (ISBN 82-539-0367-7) pp 37. 1993.

Holden, Marit; Aas, Kjersti; Lundervold, Arvid; Milvang, Otto; Storvik, Geir; Sebastini, Giovanni; Godtlibsen, Fred; Kristoffersen, Doris Tove. Assessment of tissue perfusion and characterization of lesions in dynamical MRI using contrast agents and statistical analysis - methodological considerations and clinical applications. Norsk Regnesentral. NR-notat BILD/10/93. pp 70. 1993.

Storvik, Geir; Lundervold, Arvid; Holden, Marit; Farrants, George. Diagnostic evaluation of contrast agents in medical imaging - proposals towards quantitative assessment. Norsk Regnesentral. NR-notat BILD/03/93. pp 100. 1993.

Holden, Marit; Koren, Hans. Theory and methods for automatic training and updating. Norsk Regnesentral. NR-notat BILD/08/93. pp 26. 1993.

Dahle, Øivind; Holden, Marit. Image acquisition and pre-processing methods for machine vision sensors. 864. (ISBN 82-539-0358-8) pp 63. 1993.

1992

Holden, Marit; Milvang, Otto; Aas, Kjersti. Analysis of frequency information in echocardiographic radio-frequency data acquired in the presence or absance of a contrast agent (Albunex). Norsk Regnesentral. NR-notat BILD/04/92. 1992.

Bosnes, Vidar; Blomlie, Viggo; Hald, John Kløve; Holden, Marit; Høgåsen, Gutorm Thomas; Lundervold, Arvid; Milvang, Otto; Storvik, Geir Olve; Øksendal, Anders; Aas, Kjersti. An evaluation of statistical modeling in magnetic resonance imaging using images fron the central nervous system aquired with and without a Gladolium-based contrast medium. Norsk Regnesentral. Report at the Norwegian Computing Center 855. (ISBN 82-539-0348-0) pp 47. 1992.

Bosnes, Vidar; Holden, Marit; Storvik, Geir Olve; Bosnes, Vidar. Multispectral analysis and classification system (cxxmacs): Users manual. Norsk Regnesentral. Report at the Norwegian Computing Center 863. (ISBN 82-539-0356-1) pp 86. 1992.

Eikvil, Line; Holden, Marit; Storvik, Geir Olve. Methods for updating of model parameters applied within the area of symbol recognition. Norsk Regnesentral. Report at the Norwegian Computing Center 859. (ISBN 82-539-0352-9) pp 30. 1992.

Storvik, Geir Olve; Bosnes, Vidar; Holden, Marit; Bosnes, Vidar. Improving statistical image classification by updating model parameters using unclassified pixels. Norsk Regnesentral. Report at the Norwegian Computing Center 857. (ISBN 82-539-0350-2) pp 26. 1992.

Popular scientific lecture

2009

Tvete, Ingunn Fride; Holden, Marit. Introductory microarray course; statistics. , .

2008

Tvete, Ingunn Fride; Holden, Marit. Introductory microarray course; statistics. , .

2006

Holden, Marit; Haug, Ola; Frigessi, Arnoldo. Finding differentially expressed genes from microarray data. , .

2005

Holden, Marit; Løland, Anders; Neef, Linda Reiersølmoen; Haug, Ola; Frigessi, Arnoldo. Statistics and Bioinformatics. , .

Holden, Marit. Funksjonell genomforskning, bioinformatikk og statistikk. Temakveld om bioinformatikk/medisinsk statistikk, Norsk Statistisk Forening avdeling Oslo, 11/30/2005.

2004

Holden, Marit. Course in statistics for molecular biologists. Bergen, 12/7/2004.

2002

Holden, Marit. Klustring av mikromatrisedata. Kurs for Interagon, 4/18/2002.

Article in business/trade/industry journal

2022

Eiliv, Lund; Holden, Marit; Igor, Snapkov; Lill-Tove Rasmussen, Busund; Nikita, Shvetsov; Holden, Lars. Trajectories of gene expression, seasonal influenza, and within-host seasonal immunity: transfer value to covid-19. medRxiv doi: 10.1101/2022.03.01.22271679. 2022. Fulltekst

2003

Holden, Marit; Løland, Anders. Introduksjon til analyse av cDNA mikromatrisedata. Norsk Epidemiologi (ISSN 0803-2491). pp 132291-296. 2003.

2002

Aldrin, Magne; Schweder, Tore; Holden, Marit. Spatial distribution of whales based on the Norwegian Minke Whale Survey 1996-2001. Ukjent 2002. Fulltekst

1997

Holden, Marit. Use of cut to obtain a characterization of the Kalmar elementary functions. Technical Report Department of Informatics (254, ISBN 82-7368-174-2) 1997.

1996

Holden, Marit. A proof theoretic characterization of the Kalmar elementary functions. Technical Report Department of Informatics (211, ISBN 82-7368-124-6) 1996.

1988

Holden, Marit. Weak logic theory. Doctor Scient Thesis (111) 1988.

1986

Holden, Marit. Theorem proving in classical logic applied within a logic for system specification. Research Report, Department of Informatics, University of Oslo (99) 1986.

1985

Holden, Marit. Bevisføring i klassisk logikk anvendt innenfor en logikk for systemspesifikasjon. Cand. Scient thesis 1985.

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